I compiled 1.1.2 on Ubuntu Linux 8.10 64 bit with GCC 4.3.2, Boost version
1.35, and libexpat 2.0.1. I used the option --enable-openmp. When I run
graph-tool, I get a segmentation fault when loading graphml files. I can run
the program and get the help usage, but I cannot use the --load myfile.xml
option without the segmentation fault. The graphml file is the test file
from the text on the graph-tool documentation webpage.
My command line:
$ graph-tool --load testgraphml.xml
--betweenness-centrality=VERTEX_BETWEENNESS --save betweenness_results.xml
graph-tool: received signal Segmentation fault
I could not compile the current GIT version, which is why I went with 1.1.2.
Also, I compiled with --disable-visibility and nothing changed.
I compiled 1.1.2 on Ubuntu Linux 8.10 64 bit with GCC 4.3.2, Boost
version 1.35, and libexpat 2.0.1. I used the option
--enable-openmp. When I run graph-tool, I get a segmentation fault
when loading graphml files. I can run the program and get the help
usage, but I cannot use the --load myfile.xml option without the
segmentation fault. The graphml file is the test file from the text on
the graph-tool documentation webpage.
Please try without --enable-openmp. It is still relatively
experimental... In the following weeks I will release a new version of
graph-tool with extensive modifications, which should also work fully
with openmp.
I could not compile the current GIT version, which is why I went with 1.1.2.
What was the error? You should have been able to compile it...
Great, I would love to test out the OpenMP algorithms. I have some rather
complex graphs that I would like to be able to generate metrics for in a
reasonable amount of time!
The error from the GIT version is:
make[3]: Entering directory
`/home/offero/Downloads/Dev/graph-tool_git/graph-tool/src/graph'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I.
-I../.. -I. -I.. -I../boost-workaround -DHAVE_CONFIG_H -Wall
-I/usr/include/python2.5 -pthread -I/usr/include -ftemplate-depth-150 -O99
-fvisibility=hidden -fvisibility-inlines-hidden -Wno-unknown-pragmas -MT
graph.lo -MD -MP -MF .deps/graph.Tpo -c -o graph.lo graph.cc
../../libtool: line 846: X--tag=CXX: command not found
../../libtool: line 879: libtool: ignoring unknown tag : command not found
../../libtool: line 846: X--mode=compile: command not found
../../libtool: line 1013: *** Warning: inferring the mode of operation is
deprecated.: command not found
../../libtool: line 1014: *** Future versions of Libtool will require
--mode=MODE be specified.: command not found
../../libtool: line 1157: Xg++: command not found
../../libtool: line 1157: X-DHAVE_CONFIG_H: command not found
../../libtool: line 1157: X-I.: command not found
../../libtool: line 1157: X-I../..: No such file or directory
../../libtool: line 1157: X-I.: command not found
../../libtool: line 1157: X-I..: command not found
../../libtool: line 1157: X-I../boost-workaround: No such file or directory
../../libtool: line 1157: X-DHAVE_CONFIG_H: command not found
../../libtool: line 1157: X-Wall: command not found
../../libtool: line 1157: X-I/usr/include/python2.5: No such file or
directory
../../libtool: line 1157: X-pthread: command not found
../../libtool: line 1157: X-I/usr/include: No such file or directory
../../libtool: line 1157: X-ftemplate-depth-150: command not found
../../libtool: line 1157: X-O99: command not found
../../libtool: line 1157: X-fvisibility=hidden: command not found
../../libtool: line 1157: X-fvisibility-inlines-hidden: command not found
../../libtool: line 1157: X-Wno-unknown-pragmas: command not found
../../libtool: line 1157: X-MT: command not found
../../libtool: line 1157: Xgraph.lo: command not found
../../libtool: line 1157: X-MD: command not found
../../libtool: line 1157: X-MP: command not found
../../libtool: line 1157: X-MF: command not found
../../libtool: line 1157: X.deps/graph.Tpo: No such file or directory
../../libtool: line 1157: X-c: command not found
../../libtool: line 1209: Xgraph.lo: command not found
../../libtool: line 1214: libtool: compile: cannot determine name of library
object from `': command not found
make[3]: *** [graph.lo] Error 1
make[3]: Leaving directory
`/home/offero/Downloads/Dev/graph-tool_git/graph-tool/src/graph'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory
`/home/offero/Downloads/Dev/graph-tool_git/graph-tool/src'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory
`/home/offero/Downloads/Dev/graph-tool_git/graph-tool'
make: *** [all] Error 2