This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by graph-tool configure 2.27, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --prefix=/uufs/chpc.utah.edu/sys/installdir/graph-tool/2.27 --with-pic --with-boost=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py --with-boost-python=yes --with-cgal=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1 --with-sparsehash-prefix=/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include/sparsehash ## --------- ## ## Platform. ## ## --------- ## hostname = centos7.chpc.utah.edu uname -m = x86_64 uname -r = 3.10.0-957.10.1.el7.x86_64 uname -s = Linux uname -v = #1 SMP Mon Mar 18 15:06:45 UTC 2019 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/lib PATH: /uufs/chpc.utah.edu/sys/installdir/python/3.7.3/bin PATH: /uufs/chpc.utah.edu/sys/installdir/gcc/5.4.0-c7/bin PATH: /uufs/chpc.utah.edu/sys/installdir/cmake/3.7.2-c7/bin PATH: /usr/lib64/qt-3.3/bin PATH: /usr/local/bin PATH: /bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2718: checking build system type configure:2732: result: x86_64-pc-linux-gnu configure:2752: checking host system type configure:2765: result: x86_64-pc-linux-gnu configure:2785: checking target system type configure:2798: result: x86_64-pc-linux-gnu configure:2840: checking for a BSD-compatible install configure:2908: result: /bin/install -c configure:2919: checking whether build environment is sane configure:2974: result: yes configure:3125: checking for a thread-safe mkdir -p configure:3164: result: /bin/mkdir -p configure:3171: checking for gawk configure:3187: found /bin/gawk configure:3198: result: gawk configure:3209: checking whether make sets $(MAKE) configure:3231: result: yes configure:3260: checking whether make supports nested variables configure:3277: result: yes configure:3356: checking how to create a pax tar archive configure:3367: tar --version tar (GNU tar) 1.26 Copyright (C) 2011 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later . This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Written by John Gilmore and Jay Fenlason. configure:3370: $? = 0 configure:3410: tardir=conftest.dir && eval tar --format=posix -chf - "$tardir" >conftest.tar configure:3413: $? = 0 configure:3417: tar -xf - &5 gcc (GCC) 5.4.0 Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3914: $? = 0 configure:3903: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/uufs/chpc.utah.edu/sys/installdir/gcc/5.4.0-c7/libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: ../../../srcdir/gcc/5.4.0/configure --prefix=/uufs/chpc.utah.edu/sys/installdir/gcc/5.4.0-c7 --with-gmp=/uufs/chpc.utah.edu/sys/installdir/gmp/6.1.0-g4.8.5-c7 --with-mpfr=/uufs/chpc.utah.edu/sys/installdir/mpfr/3.1.4-g4.8.5-c7 --with-mpc=/uufs/chpc.utah.edu/sys/installdir/mpc/1.0.3g-c7 --with-isl=/uufs/chpc.utah.edu/sys/installdir/isl/0.12g-c7 --enable-libada Thread model: posix gcc version 5.4.0 (GCC) configure:3914: $? = 0 configure:3903: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:3914: $? = 1 configure:3903: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:3914: $? = 1 configure:3934: checking whether the C compiler works configure:3956: gcc -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.c >&5 configure:3960: $? = 0 configure:4008: result: yes configure:4011: checking for C compiler default output file name configure:4013: result: a.out configure:4019: checking for suffix of executables configure:4026: gcc -o conftest -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.c >&5 configure:4030: $? = 0 configure:4052: result: configure:4074: checking whether we are cross compiling configure:4082: gcc -o conftest -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.c >&5 configure:4086: $? = 0 configure:4093: ./conftest configure:4097: $? = 0 configure:4112: result: no configure:4117: checking for suffix of object files configure:4139: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:4143: $? = 0 configure:4164: result: o configure:4168: checking whether we are using the GNU C compiler configure:4187: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:4187: $? = 0 configure:4196: result: yes configure:4205: checking whether gcc accepts -g configure:4225: gcc -c -g conftest.c >&5 configure:4225: $? = 0 configure:4266: result: yes configure:4283: checking for gcc option to accept ISO C89 configure:4346: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:4346: $? = 0 configure:4359: result: none needed configure:4384: checking whether gcc understands -c and -o together configure:4406: gcc -c conftest.c -o conftest2.o configure:4409: $? = 0 configure:4406: gcc -c conftest.c -o conftest2.o configure:4409: $? = 0 configure:4421: result: yes configure:4440: checking dependency style of gcc configure:4551: result: gcc3 configure:4571: checking for library containing strerror configure:4602: gcc -o conftest -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.c >&5 configure:4602: $? = 0 configure:4619: result: none required configure:4634: checking how to run the C preprocessor configure:4665: gcc -E conftest.c configure:4665: $? = 0 configure:4679: gcc -E conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:4679: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | /* end confdefs.h. */ | #include configure:4704: result: gcc -E configure:4724: gcc -E conftest.c configure:4724: $? = 0 configure:4738: gcc -E conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:4738: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | /* end confdefs.h. */ | #include configure:4767: checking for grep that handles long lines and -e configure:4825: result: /bin/grep configure:4830: checking for egrep configure:4892: result: /bin/grep -E configure:4897: checking for ANSI C header files configure:4917: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:4917: $? = 0 configure:4990: gcc -o conftest -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.c >&5 configure:4990: $? = 0 configure:4990: ./conftest configure:4990: $? = 0 configure:5001: result: yes configure:5014: checking for sys/types.h configure:5014: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5014: $? = 0 configure:5014: result: yes configure:5014: checking for sys/stat.h configure:5014: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5014: $? = 0 configure:5014: result: yes configure:5014: checking for stdlib.h configure:5014: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5014: $? = 0 configure:5014: result: yes configure:5014: checking for string.h configure:5014: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5014: $? = 0 configure:5014: result: yes configure:5014: checking for memory.h configure:5014: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5014: $? = 0 configure:5014: result: yes configure:5014: checking for strings.h configure:5014: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5014: $? = 0 configure:5014: result: yes configure:5014: checking for inttypes.h configure:5014: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5014: $? = 0 configure:5014: result: yes configure:5014: checking for stdint.h configure:5014: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5014: $? = 0 configure:5014: result: yes configure:5014: checking for unistd.h configure:5014: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5014: $? = 0 configure:5014: result: yes configure:5027: checking minix/config.h usability configure:5027: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 conftest.c:54:26: fatal error: minix/config.h: No such file or directory compilation terminated. configure:5027: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:5027: result: no configure:5027: checking minix/config.h presence configure:5027: gcc -E conftest.c conftest.c:21:26: fatal error: minix/config.h: No such file or directory compilation terminated. configure:5027: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include configure:5027: result: no configure:5027: checking for minix/config.h configure:5027: result: no configure:5048: checking whether it is safe to define __EXTENSIONS__ configure:5066: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:5066: $? = 0 configure:5073: result: yes configure:5199: checking for C++ compiler version configure:5208: g++ --version >&5 g++ (GCC) 5.4.0 Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5219: $? = 0 configure:5208: g++ -v >&5 Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/uufs/chpc.utah.edu/sys/installdir/gcc/5.4.0-c7/libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: ../../../srcdir/gcc/5.4.0/configure --prefix=/uufs/chpc.utah.edu/sys/installdir/gcc/5.4.0-c7 --with-gmp=/uufs/chpc.utah.edu/sys/installdir/gmp/6.1.0-g4.8.5-c7 --with-mpfr=/uufs/chpc.utah.edu/sys/installdir/mpfr/3.1.4-g4.8.5-c7 --with-mpc=/uufs/chpc.utah.edu/sys/installdir/mpc/1.0.3g-c7 --with-isl=/uufs/chpc.utah.edu/sys/installdir/isl/0.12g-c7 --enable-libada Thread model: posix gcc version 5.4.0 (GCC) configure:5219: $? = 0 configure:5208: g++ -V >&5 g++: error: unrecognized command line option '-V' g++: fatal error: no input files compilation terminated. configure:5219: $? = 1 configure:5208: g++ -qversion >&5 g++: error: unrecognized command line option '-qversion' g++: fatal error: no input files compilation terminated. configure:5219: $? = 1 configure:5223: checking whether we are using the GNU C++ compiler configure:5242: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 configure:5242: $? = 0 configure:5251: result: yes configure:5260: checking whether g++ accepts -g configure:5280: g++ -c -g conftest.cpp >&5 configure:5280: $? = 0 configure:5321: result: yes configure:5346: checking dependency style of g++ configure:5457: result: gcc3 configure:5482: checking for gcc option to accept ISO C99 configure:5631: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 conftest.cpp:76:29: error: expected ',' or '...' before 'text' test_restrict (ccp restrict text) ^ conftest.cpp: In function 'int test_restrict(ccp)': conftest.cpp:81:30: error: 'text' was not declared in this scope for (unsigned int i = 0; *(text+i) != '\0'; ++i) ^ conftest.cpp: In function 'int main()': conftest.cpp:130:18: error: expected initializer before 'newvar' char *restrict newvar = "Another string"; ^ conftest.cpp:138:12: error: invalid conversion from 'void*' to 'incomplete_array*' [-fpermissive] malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); ^ conftest.cpp:156:59: error: 'newvar' was not declared in this scope return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' ^ configure:5631: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | #include | #include | #include | #include | #include | | // Check varargs macros. These examples are taken from C99 6.10.3.5. | #define debug(...) fprintf (stderr, __VA_ARGS__) | #define showlist(...) puts (#__VA_ARGS__) | #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__)) | static void | test_varargs_macros (void) | { | int x = 1234; | int y = 5678; | debug ("Flag"); | debug ("X = %d\n", x); | showlist (The first, second, and third items.); | report (x>y, "x is %d but y is %d", x, y); | } | | // Check long long types. | #define BIG64 18446744073709551615ull | #define BIG32 4294967295ul | #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0) | #if !BIG_OK | your preprocessor is broken; | #endif | #if BIG_OK | #else | your preprocessor is broken; | #endif | static long long int bignum = -9223372036854775807LL; | static unsigned long long int ubignum = BIG64; | | struct incomplete_array | { | int datasize; | double data[]; | }; | | struct named_init { | int number; | const wchar_t *name; | double average; | }; | | typedef const char *ccp; | | static inline int | test_restrict (ccp restrict text) | { | // See if C++-style comments work. | // Iterate through items via the restricted pointer. | // Also check for declarations in for loops. | for (unsigned int i = 0; *(text+i) != '\0'; ++i) | continue; | return 0; | } | | // Check varargs and va_copy. | static void | test_varargs (const char *format, ...) | { | va_list args; | va_start (args, format); | va_list args_copy; | va_copy (args_copy, args); | | const char *str; | int number; | float fnumber; | | while (*format) | { | switch (*format++) | { | case 's': // string | str = va_arg (args_copy, const char *); | break; | case 'd': // int | number = va_arg (args_copy, int); | break; | case 'f': // float | fnumber = va_arg (args_copy, double); | break; | default: | break; | } | } | va_end (args_copy); | va_end (args); | } | | int | main () | { | | // Check bool. | _Bool success = false; | | // Check restrict. | if (test_restrict ("String literal") == 0) | success = true; | char *restrict newvar = "Another string"; | | // Check varargs. | test_varargs ("s, d' f .", "string", 65, 34.234); | test_varargs_macros (); | | // Check flexible array members. | struct incomplete_array *ia = | malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); | ia->datasize = 10; | for (int i = 0; i < ia->datasize; ++i) | ia->data[i] = i * 1.234; | | // Check named initializers. | struct named_init ni = { | .number = 34, | .name = L"Test wide string", | .average = 543.34343, | }; | | ni.number = 58; | | int dynamic_array[ni.number]; | dynamic_array[ni.number - 1] = 543; | | // work around unused variable warnings | return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' | || dynamic_array[ni.number - 1] != 543); | | ; | return 0; | } configure:5631: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 conftest.cpp:76:29: error: expected ',' or '...' before 'text' test_restrict (ccp restrict text) ^ conftest.cpp: In function 'int test_restrict(ccp)': conftest.cpp:81:30: error: 'text' was not declared in this scope for (unsigned int i = 0; *(text+i) != '\0'; ++i) ^ conftest.cpp: In function 'int main()': conftest.cpp:130:18: error: expected initializer before 'newvar' char *restrict newvar = "Another string"; ^ conftest.cpp:138:12: error: invalid conversion from 'void*' to 'incomplete_array*' [-fpermissive] malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); ^ conftest.cpp:156:59: error: 'newvar' was not declared in this scope return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' ^ configure:5631: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | #include | #include | #include | #include | #include | | // Check varargs macros. These examples are taken from C99 6.10.3.5. | #define debug(...) fprintf (stderr, __VA_ARGS__) | #define showlist(...) puts (#__VA_ARGS__) | #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__)) | static void | test_varargs_macros (void) | { | int x = 1234; | int y = 5678; | debug ("Flag"); | debug ("X = %d\n", x); | showlist (The first, second, and third items.); | report (x>y, "x is %d but y is %d", x, y); | } | | // Check long long types. | #define BIG64 18446744073709551615ull | #define BIG32 4294967295ul | #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0) | #if !BIG_OK | your preprocessor is broken; | #endif | #if BIG_OK | #else | your preprocessor is broken; | #endif | static long long int bignum = -9223372036854775807LL; | static unsigned long long int ubignum = BIG64; | | struct incomplete_array | { | int datasize; | double data[]; | }; | | struct named_init { | int number; | const wchar_t *name; | double average; | }; | | typedef const char *ccp; | | static inline int | test_restrict (ccp restrict text) | { | // See if C++-style comments work. | // Iterate through items via the restricted pointer. | // Also check for declarations in for loops. | for (unsigned int i = 0; *(text+i) != '\0'; ++i) | continue; | return 0; | } | | // Check varargs and va_copy. | static void | test_varargs (const char *format, ...) | { | va_list args; | va_start (args, format); | va_list args_copy; | va_copy (args_copy, args); | | const char *str; | int number; | float fnumber; | | while (*format) | { | switch (*format++) | { | case 's': // string | str = va_arg (args_copy, const char *); | break; | case 'd': // int | number = va_arg (args_copy, int); | break; | case 'f': // float | fnumber = va_arg (args_copy, double); | break; | default: | break; | } | } | va_end (args_copy); | va_end (args); | } | | int | main () | { | | // Check bool. | _Bool success = false; | | // Check restrict. | if (test_restrict ("String literal") == 0) | success = true; | char *restrict newvar = "Another string"; | | // Check varargs. | test_varargs ("s, d' f .", "string", 65, 34.234); | test_varargs_macros (); | | // Check flexible array members. | struct incomplete_array *ia = | malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); | ia->datasize = 10; | for (int i = 0; i < ia->datasize; ++i) | ia->data[i] = i * 1.234; | | // Check named initializers. | struct named_init ni = { | .number = 34, | .name = L"Test wide string", | .average = 543.34343, | }; | | ni.number = 58; | | int dynamic_array[ni.number]; | dynamic_array[ni.number - 1] = 543; | | // work around unused variable warnings | return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' | || dynamic_array[ni.number - 1] != 543); | | ; | return 0; | } configure:5631: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 conftest.cpp:76:29: error: expected ',' or '...' before 'text' test_restrict (ccp restrict text) ^ conftest.cpp: In function 'int test_restrict(ccp)': conftest.cpp:81:30: error: 'text' was not declared in this scope for (unsigned int i = 0; *(text+i) != '\0'; ++i) ^ conftest.cpp: In function 'int main()': conftest.cpp:130:18: error: expected initializer before 'newvar' char *restrict newvar = "Another string"; ^ conftest.cpp:138:12: error: invalid conversion from 'void*' to 'incomplete_array*' [-fpermissive] malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); ^ conftest.cpp:156:59: error: 'newvar' was not declared in this scope return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' ^ configure:5631: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | #include | #include | #include | #include | #include | | // Check varargs macros. These examples are taken from C99 6.10.3.5. | #define debug(...) fprintf (stderr, __VA_ARGS__) | #define showlist(...) puts (#__VA_ARGS__) | #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__)) | static void | test_varargs_macros (void) | { | int x = 1234; | int y = 5678; | debug ("Flag"); | debug ("X = %d\n", x); | showlist (The first, second, and third items.); | report (x>y, "x is %d but y is %d", x, y); | } | | // Check long long types. | #define BIG64 18446744073709551615ull | #define BIG32 4294967295ul | #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0) | #if !BIG_OK | your preprocessor is broken; | #endif | #if BIG_OK | #else | your preprocessor is broken; | #endif | static long long int bignum = -9223372036854775807LL; | static unsigned long long int ubignum = BIG64; | | struct incomplete_array | { | int datasize; | double data[]; | }; | | struct named_init { | int number; | const wchar_t *name; | double average; | }; | | typedef const char *ccp; | | static inline int | test_restrict (ccp restrict text) | { | // See if C++-style comments work. | // Iterate through items via the restricted pointer. | // Also check for declarations in for loops. | for (unsigned int i = 0; *(text+i) != '\0'; ++i) | continue; | return 0; | } | | // Check varargs and va_copy. | static void | test_varargs (const char *format, ...) | { | va_list args; | va_start (args, format); | va_list args_copy; | va_copy (args_copy, args); | | const char *str; | int number; | float fnumber; | | while (*format) | { | switch (*format++) | { | case 's': // string | str = va_arg (args_copy, const char *); | break; | case 'd': // int | number = va_arg (args_copy, int); | break; | case 'f': // float | fnumber = va_arg (args_copy, double); | break; | default: | break; | } | } | va_end (args_copy); | va_end (args); | } | | int | main () | { | | // Check bool. | _Bool success = false; | | // Check restrict. | if (test_restrict ("String literal") == 0) | success = true; | char *restrict newvar = "Another string"; | | // Check varargs. | test_varargs ("s, d' f .", "string", 65, 34.234); | test_varargs_macros (); | | // Check flexible array members. | struct incomplete_array *ia = | malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); | ia->datasize = 10; | for (int i = 0; i < ia->datasize; ++i) | ia->data[i] = i * 1.234; | | // Check named initializers. | struct named_init ni = { | .number = 34, | .name = L"Test wide string", | .average = 543.34343, | }; | | ni.number = 58; | | int dynamic_array[ni.number]; | dynamic_array[ni.number - 1] = 543; | | // work around unused variable warnings | return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' | || dynamic_array[ni.number - 1] != 543); | | ; | return 0; | } configure:5631: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 conftest.cpp:76:29: error: expected ',' or '...' before 'text' test_restrict (ccp restrict text) ^ conftest.cpp: In function 'int test_restrict(ccp)': conftest.cpp:81:30: error: 'text' was not declared in this scope for (unsigned int i = 0; *(text+i) != '\0'; ++i) ^ conftest.cpp: In function 'int main()': conftest.cpp:130:18: error: expected initializer before 'newvar' char *restrict newvar = "Another string"; ^ conftest.cpp:138:12: error: invalid conversion from 'void*' to 'incomplete_array*' [-fpermissive] malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); ^ conftest.cpp:156:59: error: 'newvar' was not declared in this scope return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' ^ configure:5631: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | #include | #include | #include | #include | #include | | // Check varargs macros. These examples are taken from C99 6.10.3.5. | #define debug(...) fprintf (stderr, __VA_ARGS__) | #define showlist(...) puts (#__VA_ARGS__) | #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__)) | static void | test_varargs_macros (void) | { | int x = 1234; | int y = 5678; | debug ("Flag"); | debug ("X = %d\n", x); | showlist (The first, second, and third items.); | report (x>y, "x is %d but y is %d", x, y); | } | | // Check long long types. | #define BIG64 18446744073709551615ull | #define BIG32 4294967295ul | #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0) | #if !BIG_OK | your preprocessor is broken; | #endif | #if BIG_OK | #else | your preprocessor is broken; | #endif | static long long int bignum = -9223372036854775807LL; | static unsigned long long int ubignum = BIG64; | | struct incomplete_array | { | int datasize; | double data[]; | }; | | struct named_init { | int number; | const wchar_t *name; | double average; | }; | | typedef const char *ccp; | | static inline int | test_restrict (ccp restrict text) | { | // See if C++-style comments work. | // Iterate through items via the restricted pointer. | // Also check for declarations in for loops. | for (unsigned int i = 0; *(text+i) != '\0'; ++i) | continue; | return 0; | } | | // Check varargs and va_copy. | static void | test_varargs (const char *format, ...) | { | va_list args; | va_start (args, format); | va_list args_copy; | va_copy (args_copy, args); | | const char *str; | int number; | float fnumber; | | while (*format) | { | switch (*format++) | { | case 's': // string | str = va_arg (args_copy, const char *); | break; | case 'd': // int | number = va_arg (args_copy, int); | break; | case 'f': // float | fnumber = va_arg (args_copy, double); | break; | default: | break; | } | } | va_end (args_copy); | va_end (args); | } | | int | main () | { | | // Check bool. | _Bool success = false; | | // Check restrict. | if (test_restrict ("String literal") == 0) | success = true; | char *restrict newvar = "Another string"; | | // Check varargs. | test_varargs ("s, d' f .", "string", 65, 34.234); | test_varargs_macros (); | | // Check flexible array members. | struct incomplete_array *ia = | malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); | ia->datasize = 10; | for (int i = 0; i < ia->datasize; ++i) | ia->data[i] = i * 1.234; | | // Check named initializers. | struct named_init ni = { | .number = 34, | .name = L"Test wide string", | .average = 543.34343, | }; | | ni.number = 58; | | int dynamic_array[ni.number]; | dynamic_array[ni.number - 1] = 543; | | // work around unused variable warnings | return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' | || dynamic_array[ni.number - 1] != 543); | | ; | return 0; | } configure:5631: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 conftest.cpp:76:29: error: expected ',' or '...' before 'text' test_restrict (ccp restrict text) ^ conftest.cpp: In function 'int test_restrict(ccp)': conftest.cpp:81:30: error: 'text' was not declared in this scope for (unsigned int i = 0; *(text+i) != '\0'; ++i) ^ conftest.cpp: In function 'int main()': conftest.cpp:130:18: error: expected initializer before 'newvar' char *restrict newvar = "Another string"; ^ conftest.cpp:138:12: error: invalid conversion from 'void*' to 'incomplete_array*' [-fpermissive] malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); ^ conftest.cpp:156:59: error: 'newvar' was not declared in this scope return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' ^ configure:5631: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | #include | #include | #include | #include | #include | | // Check varargs macros. These examples are taken from C99 6.10.3.5. | #define debug(...) fprintf (stderr, __VA_ARGS__) | #define showlist(...) puts (#__VA_ARGS__) | #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__)) | static void | test_varargs_macros (void) | { | int x = 1234; | int y = 5678; | debug ("Flag"); | debug ("X = %d\n", x); | showlist (The first, second, and third items.); | report (x>y, "x is %d but y is %d", x, y); | } | | // Check long long types. | #define BIG64 18446744073709551615ull | #define BIG32 4294967295ul | #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0) | #if !BIG_OK | your preprocessor is broken; | #endif | #if BIG_OK | #else | your preprocessor is broken; | #endif | static long long int bignum = -9223372036854775807LL; | static unsigned long long int ubignum = BIG64; | | struct incomplete_array | { | int datasize; | double data[]; | }; | | struct named_init { | int number; | const wchar_t *name; | double average; | }; | | typedef const char *ccp; | | static inline int | test_restrict (ccp restrict text) | { | // See if C++-style comments work. | // Iterate through items via the restricted pointer. | // Also check for declarations in for loops. | for (unsigned int i = 0; *(text+i) != '\0'; ++i) | continue; | return 0; | } | | // Check varargs and va_copy. | static void | test_varargs (const char *format, ...) | { | va_list args; | va_start (args, format); | va_list args_copy; | va_copy (args_copy, args); | | const char *str; | int number; | float fnumber; | | while (*format) | { | switch (*format++) | { | case 's': // string | str = va_arg (args_copy, const char *); | break; | case 'd': // int | number = va_arg (args_copy, int); | break; | case 'f': // float | fnumber = va_arg (args_copy, double); | break; | default: | break; | } | } | va_end (args_copy); | va_end (args); | } | | int | main () | { | | // Check bool. | _Bool success = false; | | // Check restrict. | if (test_restrict ("String literal") == 0) | success = true; | char *restrict newvar = "Another string"; | | // Check varargs. | test_varargs ("s, d' f .", "string", 65, 34.234); | test_varargs_macros (); | | // Check flexible array members. | struct incomplete_array *ia = | malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); | ia->datasize = 10; | for (int i = 0; i < ia->datasize; ++i) | ia->data[i] = i * 1.234; | | // Check named initializers. | struct named_init ni = { | .number = 34, | .name = L"Test wide string", | .average = 543.34343, | }; | | ni.number = 58; | | int dynamic_array[ni.number]; | dynamic_array[ni.number - 1] = 543; | | // work around unused variable warnings | return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' | || dynamic_array[ni.number - 1] != 543); | | ; | return 0; | } configure:5631: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 conftest.cpp:76:29: error: expected ',' or '...' before 'text' test_restrict (ccp restrict text) ^ conftest.cpp: In function 'int test_restrict(ccp)': conftest.cpp:81:30: error: 'text' was not declared in this scope for (unsigned int i = 0; *(text+i) != '\0'; ++i) ^ conftest.cpp: In function 'int main()': conftest.cpp:130:18: error: expected initializer before 'newvar' char *restrict newvar = "Another string"; ^ conftest.cpp:138:12: error: invalid conversion from 'void*' to 'incomplete_array*' [-fpermissive] malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); ^ conftest.cpp:156:59: error: 'newvar' was not declared in this scope return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' ^ configure:5631: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | #include | #include | #include | #include | #include | | // Check varargs macros. These examples are taken from C99 6.10.3.5. | #define debug(...) fprintf (stderr, __VA_ARGS__) | #define showlist(...) puts (#__VA_ARGS__) | #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__)) | static void | test_varargs_macros (void) | { | int x = 1234; | int y = 5678; | debug ("Flag"); | debug ("X = %d\n", x); | showlist (The first, second, and third items.); | report (x>y, "x is %d but y is %d", x, y); | } | | // Check long long types. | #define BIG64 18446744073709551615ull | #define BIG32 4294967295ul | #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0) | #if !BIG_OK | your preprocessor is broken; | #endif | #if BIG_OK | #else | your preprocessor is broken; | #endif | static long long int bignum = -9223372036854775807LL; | static unsigned long long int ubignum = BIG64; | | struct incomplete_array | { | int datasize; | double data[]; | }; | | struct named_init { | int number; | const wchar_t *name; | double average; | }; | | typedef const char *ccp; | | static inline int | test_restrict (ccp restrict text) | { | // See if C++-style comments work. | // Iterate through items via the restricted pointer. | // Also check for declarations in for loops. | for (unsigned int i = 0; *(text+i) != '\0'; ++i) | continue; | return 0; | } | | // Check varargs and va_copy. | static void | test_varargs (const char *format, ...) | { | va_list args; | va_start (args, format); | va_list args_copy; | va_copy (args_copy, args); | | const char *str; | int number; | float fnumber; | | while (*format) | { | switch (*format++) | { | case 's': // string | str = va_arg (args_copy, const char *); | break; | case 'd': // int | number = va_arg (args_copy, int); | break; | case 'f': // float | fnumber = va_arg (args_copy, double); | break; | default: | break; | } | } | va_end (args_copy); | va_end (args); | } | | int | main () | { | | // Check bool. | _Bool success = false; | | // Check restrict. | if (test_restrict ("String literal") == 0) | success = true; | char *restrict newvar = "Another string"; | | // Check varargs. | test_varargs ("s, d' f .", "string", 65, 34.234); | test_varargs_macros (); | | // Check flexible array members. | struct incomplete_array *ia = | malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); | ia->datasize = 10; | for (int i = 0; i < ia->datasize; ++i) | ia->data[i] = i * 1.234; | | // Check named initializers. | struct named_init ni = { | .number = 34, | .name = L"Test wide string", | .average = 543.34343, | }; | | ni.number = 58; | | int dynamic_array[ni.number]; | dynamic_array[ni.number - 1] = 543; | | // work around unused variable warnings | return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' | || dynamic_array[ni.number - 1] != 543); | | ; | return 0; | } configure:5631: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 conftest.cpp:76:29: error: expected ',' or '...' before 'text' test_restrict (ccp restrict text) ^ conftest.cpp: In function 'int test_restrict(ccp)': conftest.cpp:81:30: error: 'text' was not declared in this scope for (unsigned int i = 0; *(text+i) != '\0'; ++i) ^ conftest.cpp: In function 'int main()': conftest.cpp:130:18: error: expected initializer before 'newvar' char *restrict newvar = "Another string"; ^ conftest.cpp:138:12: error: invalid conversion from 'void*' to 'incomplete_array*' [-fpermissive] malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); ^ conftest.cpp:156:59: error: 'newvar' was not declared in this scope return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' ^ configure:5631: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | #include | #include | #include | #include | #include | | // Check varargs macros. These examples are taken from C99 6.10.3.5. | #define debug(...) fprintf (stderr, __VA_ARGS__) | #define showlist(...) puts (#__VA_ARGS__) | #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__)) | static void | test_varargs_macros (void) | { | int x = 1234; | int y = 5678; | debug ("Flag"); | debug ("X = %d\n", x); | showlist (The first, second, and third items.); | report (x>y, "x is %d but y is %d", x, y); | } | | // Check long long types. | #define BIG64 18446744073709551615ull | #define BIG32 4294967295ul | #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0) | #if !BIG_OK | your preprocessor is broken; | #endif | #if BIG_OK | #else | your preprocessor is broken; | #endif | static long long int bignum = -9223372036854775807LL; | static unsigned long long int ubignum = BIG64; | | struct incomplete_array | { | int datasize; | double data[]; | }; | | struct named_init { | int number; | const wchar_t *name; | double average; | }; | | typedef const char *ccp; | | static inline int | test_restrict (ccp restrict text) | { | // See if C++-style comments work. | // Iterate through items via the restricted pointer. | // Also check for declarations in for loops. | for (unsigned int i = 0; *(text+i) != '\0'; ++i) | continue; | return 0; | } | | // Check varargs and va_copy. | static void | test_varargs (const char *format, ...) | { | va_list args; | va_start (args, format); | va_list args_copy; | va_copy (args_copy, args); | | const char *str; | int number; | float fnumber; | | while (*format) | { | switch (*format++) | { | case 's': // string | str = va_arg (args_copy, const char *); | break; | case 'd': // int | number = va_arg (args_copy, int); | break; | case 'f': // float | fnumber = va_arg (args_copy, double); | break; | default: | break; | } | } | va_end (args_copy); | va_end (args); | } | | int | main () | { | | // Check bool. | _Bool success = false; | | // Check restrict. | if (test_restrict ("String literal") == 0) | success = true; | char *restrict newvar = "Another string"; | | // Check varargs. | test_varargs ("s, d' f .", "string", 65, 34.234); | test_varargs_macros (); | | // Check flexible array members. | struct incomplete_array *ia = | malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); | ia->datasize = 10; | for (int i = 0; i < ia->datasize; ++i) | ia->data[i] = i * 1.234; | | // Check named initializers. | struct named_init ni = { | .number = 34, | .name = L"Test wide string", | .average = 543.34343, | }; | | ni.number = 58; | | int dynamic_array[ni.number]; | dynamic_array[ni.number - 1] = 543; | | // work around unused variable warnings | return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' | || dynamic_array[ni.number - 1] != 543); | | ; | return 0; | } configure:5647: result: unsupported configure:5657: checking for gcc option to accept ISO C89 configure:5733: result: none needed configure:5752: checking for gcc option to accept ISO Standard C configure:5763: result: none needed configure:5776: checking how to run the C++ preprocessor configure:5803: g++ -E conftest.cpp configure:5803: $? = 0 configure:5817: g++ -E conftest.cpp conftest.cpp:26:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:5817: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | #include configure:5842: result: g++ -E configure:5862: g++ -E conftest.cpp configure:5862: $? = 0 configure:5876: g++ -E conftest.cpp conftest.cpp:26:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:5876: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | #include configure:5905: checking for ANSI C header files configure:6009: result: yes configure:6095: checking how to print strings configure:6122: result: printf configure:6143: checking for a sed that does not truncate output configure:6207: result: /bin/sed configure:6225: checking for fgrep configure:6287: result: /bin/grep -F configure:6322: checking for ld used by gcc configure:6389: result: /bin/ld configure:6396: checking if the linker (/bin/ld) is GNU ld configure:6411: result: yes configure:6423: checking for BSD- or MS-compatible name lister (nm) configure:6477: result: /bin/nm -B configure:6607: checking the name lister (/bin/nm -B) interface configure:6614: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 configure:6617: /bin/nm -B "conftest.o" configure:6620: output 0000000000000000 B some_variable configure:6627: result: BSD nm configure:6630: checking whether ln -s works configure:6634: result: yes configure:6642: checking the maximum length of command line arguments configure:6773: result: 3458764513820540925 configure:6821: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:6861: result: func_convert_file_noop configure:6868: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:6888: result: func_convert_file_noop configure:6895: checking for /bin/ld option to reload object files configure:6902: result: -r configure:6976: checking for objdump configure:6992: found /bin/objdump configure:7003: result: objdump configure:7035: checking how to recognize dependent libraries configure:7235: result: pass_all configure:7320: checking for dlltool configure:7350: result: no configure:7380: checking how to associate runtime and link libraries configure:7407: result: printf %s\n configure:7467: checking for ar configure:7483: found /bin/ar configure:7494: result: ar configure:7547: checking for archiver @FILE support configure:7564: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 configure:7564: $? = 0 configure:7567: ar cr libconftest.a @conftest.lst >&5 configure:7570: $? = 0 configure:7575: ar cr libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:7578: $? = 1 configure:7590: result: @ configure:7648: checking for strip configure:7664: found /bin/strip configure:7675: result: strip configure:7747: checking for ranlib configure:7763: found /bin/ranlib configure:7774: result: ranlib configure:7876: checking command to parse /bin/nm -B output from gcc object configure:8029: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 configure:8032: $? = 0 configure:8036: /bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:8039: $? = 0 configure:8105: g++ -o conftest -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.cpp conftstm.o >&5 configure:8108: $? = 0 configure:8146: result: ok configure:8193: checking for sysroot configure:8223: result: no configure:8230: checking for a working dd configure:8268: result: /bin/dd configure:8272: checking how to truncate binary pipes configure:8287: result: /bin/dd bs=4096 count=1 configure:8423: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 configure:8426: $? = 0 configure:8616: checking for mt configure:8646: result: no configure:8666: checking if : is a manifest tool configure:8672: : '-?' configure:8680: result: no configure:9354: checking for dlfcn.h configure:9354: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 configure:9354: $? = 0 configure:9354: result: yes configure:9590: checking for objdir configure:9605: result: .libs configure:9865: checking if gcc supports -fno-rtti -fno-exceptions configure:9883: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C configure:9887: $? = 0 configure:9900: result: no configure:10258: checking for gcc option to produce PIC configure:10265: result: -fPIC -DPIC configure:10273: checking if gcc PIC flag -fPIC -DPIC works configure:10291: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -fPIC -DPIC -DPIC conftest.c >&5 configure:10295: $? = 0 configure:10308: result: yes configure:10337: checking if gcc static flag -static works configure:10365: result: no configure:10380: checking if gcc supports -c -o file.o configure:10401: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -o out/conftest2.o conftest.c >&5 configure:10405: $? = 0 configure:10427: result: yes configure:10435: checking if gcc supports -c -o file.o configure:10482: result: yes configure:10515: checking whether the gcc linker (/bin/ld -m elf_x86_64) supports shared libraries configure:11776: result: yes configure:11813: checking whether -lc should be explicitly linked in configure:11821: gcc -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.c >&5 configure:11824: $? = 0 configure:11839: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 configure:11842: $? = 0 configure:11856: result: no configure:12016: checking dynamic linker characteristics configure:12597: gcc -o conftest -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -Wl,-rpath -Wl,/foo conftest.c >&5 configure:12597: $? = 0 configure:12834: result: GNU/Linux ld.so configure:12956: checking how to hardcode library paths into programs configure:12981: result: immediate configure:13529: checking whether stripping libraries is possible configure:13538: result: yes configure:13580: checking if libtool supports shared libraries configure:13582: result: yes configure:13585: checking whether to build shared libraries configure:13610: result: yes configure:13613: checking whether to build static libraries configure:13617: result: no configure:13640: checking how to run the C++ preprocessor configure:13706: result: g++ -E configure:13726: g++ -E conftest.cpp configure:13726: $? = 0 configure:13740: g++ -E conftest.cpp conftest.cpp:29:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:13740: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:13902: checking for ld used by g++ configure:13969: result: /bin/ld -m elf_x86_64 configure:13976: checking if the linker (/bin/ld -m elf_x86_64) is GNU ld configure:13991: result: yes configure:14046: checking whether the g++ linker (/bin/ld -m elf_x86_64) supports shared libraries configure:15120: result: yes configure:15156: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 configure:15159: $? = 0 configure:15640: checking for g++ option to produce PIC configure:15647: result: -fPIC -DPIC configure:15655: checking if g++ PIC flag -fPIC -DPIC works configure:15673: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -fPIC -DPIC -DPIC conftest.cpp >&5 configure:15677: $? = 0 configure:15690: result: yes configure:15713: checking if g++ static flag -static works configure:15741: result: no configure:15753: checking if g++ supports -c -o file.o configure:15774: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -o out/conftest2.o conftest.cpp >&5 configure:15778: $? = 0 configure:15800: result: yes configure:15805: checking if g++ supports -c -o file.o configure:15852: result: yes configure:15882: checking whether the g++ linker (/bin/ld -m elf_x86_64) supports shared libraries configure:15922: result: yes configure:16063: checking dynamic linker characteristics configure:16808: result: GNU/Linux ld.so configure:16873: checking how to hardcode library paths into programs configure:16898: result: immediate configure:17015: checking for pkg-config configure:17033: found /bin/pkg-config configure:17045: result: /bin/pkg-config configure:17070: checking pkg-config is at least version 0.9.0 configure:17073: result: yes configure:17104: checking whether g++ supports C++14 features by default configure:17518: g++ -c -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 conftest.cpp >&5 configure:17518: $? = 0 configure:17525: result: yes configure:18002: checking whether to enable debug info configure:18021: result: no configure:18035: checking whether to enable parallel algorithms with openmp configure:18123: checking for OpenMP flag of C++ compiler configure:18168: g++ -o conftest -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -fopenmp -DNDEBUG -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.cpp >&5 configure:18168: $? = 0 configure:18177: result: -fopenmp configure:18201: checking whether to enable cairo drawing configure:18214: result: yes configure:18309: checking for Expat XML Parser headers in /usr/include configure:18333: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/usr/include conftest.cpp >&5 configure:18333: $? = 0 configure:18337: result: found configure:18358: checking for Expat XML Parser libraries configure:18386: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/usr/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -L/usr/lib conftest.cpp -lexpat >&5 /bin/ld: skipping incompatible /usr/lib/libexpat.so when searching for -lexpat /bin/ld: skipping incompatible /usr/lib/libexpat.a when searching for -lexpat /bin/ld: skipping incompatible /usr/lib/libm.so when searching for -lm /bin/ld: skipping incompatible /usr/lib/libm.a when searching for -lm /bin/ld: skipping incompatible /usr/lib/libpthread.so when searching for -lpthread /bin/ld: skipping incompatible /usr/lib/libpthread.a when searching for -lpthread /bin/ld: skipping incompatible /usr/lib/libc.so when searching for -lc /bin/ld: skipping incompatible /usr/lib/libc.a when searching for -lc configure:18386: $? = 0 configure:18391: result: found configure:18417: checking for Expat XML Parser configure:18432: result: yes configure:18545: checking for a Python interpreter with version >= 2.7 configure:18562: python -c import sys # split strings by '.' and convert to numeric. Append some zeros # because we need at least 4 digits for the hex conversion. # map returns an iterator in Python 3.0 and a list in 2.x minver = list(map(int, '2.7'.split('.'))) + [0, 0, 0] minverhex = 0 # xrange is not present in Python 3.0 and range returns an iterator for i in list(range(0, 4)): minverhex = (minverhex << 8) + minver[i] sys.exit(sys.hexversion < minverhex) configure:18565: $? = 0 configure:18571: result: python configure:18579: checking for python configure:18597: found /uufs/chpc.utah.edu/sys/installdir/python/3.7.3/bin/python configure:18609: result: /uufs/chpc.utah.edu/sys/installdir/python/3.7.3/bin/python configure:18627: checking for python version configure:18634: result: 3.7 configure:18646: checking for python platform configure:18653: result: linux configure:18679: checking for python script directory configure:18714: result: ${prefix}/lib/python3.7/site-packages configure:18723: checking for python extension module directory configure:18758: result: ${exec_prefix}/lib/python3.7/site-packages configure:18782: checking for python3.7 configure:18812: result: /uufs/chpc.utah.edu/sys/installdir/python/3.7.3/bin/python configure:18828: checking for a version of Python >= '2.1.0' configure:18854: result: yes configure:18862: checking for a version of Python == '3.7.3' configure:18868: result: yes configure:18885: checking for the distutils Python package configure:18889: result: yes configure:18903: checking for Python include path configure:18919: result: -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m configure:18926: checking for Python library path configure:19003: result: -L/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib -lpython3.7m configure:19010: checking for Python site-packages path configure:19016: result: /uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib/python3.7/site-packages configure:19023: checking python extra libraries configure:19030: result: -lcrypt -lpthread -ldl -lutil -lm configure:19037: checking python extra linking flags configure:19044: result: -Xlinker -export-dynamic configure:19051: checking consistency of all components of python development environment configure:19079: gcc -o conftest -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -Xlinker -export-dynamic conftest.c -L/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib -lpython3.7m -lcrypt -lpthread -ldl -lutil -lm -lcrypt -lpthread -ldl -lutil -lm >&5 configure:19079: $? = 0 configure:19097: result: yes configure:19221: checking for boostlib >= 1.55.0 (105500) includes in "/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include" configure:19225: result: yes configure:19229: checking for boostlib >= 1.55.0 (105500) lib path in "/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib/x86_64-linux-gnu" configure:19239: result: no configure:19229: checking for boostlib >= 1.55.0 (105500) lib path in "/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib64" configure:19239: result: no configure:19229: checking for boostlib >= 1.55.0 (105500) lib path in "/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/libx32" configure:19239: result: no configure:19229: checking for boostlib >= 1.55.0 (105500) lib path in "/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib" configure:19233: result: yes configure:19273: checking for boostlib >= 1.55.0 (105500) configure:19305: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.cpp >&5 configure:19305: $? = 0 configure:19307: result: yes configure:19498: checking whether the Boost::Python library is available configure:19516: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m -DNDEBUG conftest.cpp >&5 configure:19516: $? = 0 configure:19524: result: yes configure:19543: checking whether boost_python is the correct library configure:19562: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m -DNDEBUG -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.cpp -lboost_python -L/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib -lpython3.7m >&5 /tmp/cckIJQE4.o: In function `PyInit_test': conftest.cpp:(.text+0x50): undefined reference to `boost::python::detail::init_module(PyModuleDef&, void (*)())' collect2: error: ld returned 1 exit status configure:19562: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_CXX14 1 | #define OPENMP_MIN_THRESH 300 | #define HAVE_OPENMP 1 | #define HAVE_PYTHON "3.7" | #define HAVE_BOOST /**/ | #define HAVE_BOOST_PYTHON /**/ | /* end confdefs.h. */ | | #include | BOOST_PYTHON_MODULE(test) { throw "Boost::Python test."; } | int | main () | { | | ; | return 0; | } configure:19571: result: no configure:19543: checking whether boost_python37 is the correct library configure:19562: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m -DNDEBUG -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.cpp -lboost_python37 -L/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib -lpython3.7m >&5 configure:19562: $? = 0 configure:19571: result: yes configure:19623: checking whether the Boost::IOStreams library is available configure:19651: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.cpp >&5 configure:19651: $? = 0 configure:19665: result: yes configure:19676: checking for exit in -lboost_iostreams configure:19701: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib conftest.cpp -lboost_iostreams >&5 configure:19701: $? = 0 configure:19711: result: yes configure:19859: checking whether the Boost::Regex library is available configure:19882: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.cpp >&5 configure:19882: $? = 0 configure:19896: result: yes configure:19907: checking for exit in -lboost_regex configure:19932: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib conftest.cpp -lboost_regex >&5 configure:19932: $? = 0 configure:19942: result: yes configure:20091: checking whether the Boost::Context library is available configure:20115: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.cpp >&5 configure:20115: $? = 0 configure:20130: result: yes configure:20145: checking for exit in -lboost_context-mt configure:20170: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib conftest.cpp -lboost_context-mt >&5 configure:20170: $? = 0 configure:20180: result: yes configure:20339: checking whether the Boost::Coroutine library is available configure:20363: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.cpp >&5 In file included from /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/standard_stack_allocator.hpp:21:0, from /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/stack_allocator.hpp:16, from /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/attributes.hpp:15, from /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/all.hpp:10, from conftest.cpp:38: /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/detail/config.hpp:17:4: warning: #warning "Boost.Coroutine is now deprecated. Please switch to Boost.Coroutine2. To disable this warning message, define BOOST_COROUTINES_NO_DEPRECATION_WARNING." [-Wcpp] # warning "Boost.Coroutine is now deprecated. Please switch to Boost.Coroutine2. To disable this warning message, define BOOST_COROUTINES_NO_DEPRECATION_WARNING." ^ In file included from /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/coroutine.hpp:10:0, from /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/all.hpp:11, from conftest.cpp:38: /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/asymmetric_coroutine.hpp:14:4: warning: #warning "Boost.Coroutine is now deprecated. Please switch to Boost.Coroutine2. To disable this warning message, define BOOST_COROUTINES_NO_DEPRECATION_WARNING." [-Wcpp] # warning "Boost.Coroutine is now deprecated. Please switch to Boost.Coroutine2. To disable this warning message, define BOOST_COROUTINES_NO_DEPRECATION_WARNING." ^ In file included from /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/coroutine.hpp:11:0, from /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/all.hpp:11, from conftest.cpp:38: /uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include/boost/coroutine/symmetric_coroutine.hpp:14:4: warning: #warning "Boost.Coroutine is now deprecated. Please switch to Boost.Coroutine2. To disable this warning message, define BOOST_COROUTINES_NO_DEPRECATION_WARNING." [-Wcpp] # warning "Boost.Coroutine is now deprecated. Please switch to Boost.Coroutine2. To disable this warning message, define BOOST_COROUTINES_NO_DEPRECATION_WARNING." ^ conftest.cpp: In function 'int main()': conftest.cpp:42:40: warning: unused variable 'f' [-Wunused-variable] boost::coroutines::coroutine< void() > f; ^ configure:20363: $? = 0 configure:20378: result: yes configure:20393: checking for exit in -lboost_coroutine configure:20418: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib conftest.cpp -lboost_coroutine >&5 configure:20418: $? = 0 configure:20428: result: yes configure:20588: checking whether the Boost::Graph library is available configure:20610: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.cpp >&5 configure:20610: $? = 0 configure:20624: result: yes configure:20635: checking for exit in -lboost_graph configure:20660: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib conftest.cpp -lboost_graph >&5 configure:20660: $? = 0 configure:20670: result: yes configure:20817: checking whether the Boost::Thread library is available configure:20850: g++ -c -pthread -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include conftest.cpp >&5 configure:20850: $? = 0 configure:20865: result: yes configure:20894: checking for exit in -lboost_thread-mt configure:20919: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib conftest.cpp -lboost_thread-mt >&5 configure:20919: $? = 0 configure:20929: result: yes configure:21075: checking for __gmpz_init in -lgmp configure:21100: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt conftest.cpp -lgmp >&5 configure:21100: $? = 0 configure:21109: result: yes configure:21141: checking for __gmpz_init in -lgmp configure:21175: result: yes configure:21200: checking whether CGAL is available in /uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1 configure:21236: g++ -o conftest -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -DNDEBUG -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -pthread -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib -lCGAL -lCGAL_Core -lgmp -lboost_thread-mt -lpthread conftest.cpp -lgmp -lgmp >&5 /bin/ld: warning: libboost_thread-mt.so.1.53.0, needed by /uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64/libCGAL_Core.so, may conflict with libboost_thread-mt.so.1.68.0 /bin/ld: warning: libboost_thread-mt.so.1.53.0, needed by /uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64/libCGAL_Core.so, may conflict with libboost_thread-mt.so.1.68.0 configure:21236: $? = 0 configure:21236: ./conftest configure:21236: $? = 0 configure:21252: result: yes configure:21283: checking whether to enable cgal debbuging with valgrind configure:21296: result: no configure:21314: checking python module: numpy configure:21319: result: yes configure:21345: checking for numpy/arrayobject.h configure:21345: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib/python3.7/site-packages/numpy-1.16.2-py3.7-linux-x86_64.egg/numpy/core/include -DNDEBUG conftest.cpp >&5 configure:21345: $? = 0 configure:21345: result: yes configure:21367: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib/python3.7/site-packages/numpy-1.16.2-py3.7-linux-x86_64.egg/numpy/core/include -DNDEBUG conftest.cpp >&5 configure:21367: $? = 0 configure:21378: checking for CAIROMM configure:21385: $PKG_CONFIG --exists --print-errors "cairomm-1.0" configure:21388: $? = 0 configure:21402: $PKG_CONFIG --exists --print-errors "cairomm-1.0" configure:21405: $? = 0 configure:21463: result: yes configure:21484: checking python module: cairo configure:21489: result: yes configure:21518: checking pycairo/py3cairo.h usability configure:21518: g++ -c -fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 -I/usr/include/cairomm-1.0 -I/usr/lib64/cairomm-1.0/include -I/usr/include/cairo -I/usr/include/sigc++-2.0 -I/usr/lib64/sigc++-2.0/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng15 -I/usr/include/uuid -I/usr/include/libdrm -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m -DNDEBUG conftest.cpp >&5 conftest.cpp:80:30: fatal error: pycairo/py3cairo.h: No such file or directory compilation terminated. configure:21518: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_CXX14 1 | #define OPENMP_MIN_THRESH 300 | #define HAVE_OPENMP 1 | #define HAVE_PYTHON "3.7" | #define HAVE_BOOST /**/ | #define HAVE_BOOST_PYTHON /**/ | #define HAVE_BOOST_IOSTREAMS /**/ | #define HAVE_BOOST_REGEX /**/ | #define HAVE_BOOST_CONTEXT /**/ | #define HAVE_BOOST_COROUTINE /**/ | #define BOOST_COROUTINE_STACK_SIZE 5242880 | #define HAVE_BOOST_GRAPH /**/ | #define HAVE_BOOST_THREAD /**/ | #define HAVE_LIBGMP 1 | #define HAVE_LIBGMP 1 | #define HAVE_CGAL 1 | #define HAVE_CAIROMM 1 | #define PYCAIRO_HEADER | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:21518: result: no configure:21518: checking pycairo/py3cairo.h presence configure:21518: g++ -E -I/usr/include/cairomm-1.0 -I/usr/lib64/cairomm-1.0/include -I/usr/include/cairo -I/usr/include/sigc++-2.0 -I/usr/lib64/sigc++-2.0/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng15 -I/usr/include/uuid -I/usr/include/libdrm -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m -DNDEBUG conftest.cpp conftest.cpp:47:30: fatal error: pycairo/py3cairo.h: No such file or directory compilation terminated. configure:21518: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "graph-tool" | #define PACKAGE_TARNAME "graph-tool" | #define PACKAGE_VERSION "2.27" | #define PACKAGE_STRING "graph-tool 2.27" | #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" | #define PACKAGE_URL "http://graph-tool.skewed.de" | #define PACKAGE "graph-tool" | #define VERSION "2.27" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_CXX14 1 | #define OPENMP_MIN_THRESH 300 | #define HAVE_OPENMP 1 | #define HAVE_PYTHON "3.7" | #define HAVE_BOOST /**/ | #define HAVE_BOOST_PYTHON /**/ | #define HAVE_BOOST_IOSTREAMS /**/ | #define HAVE_BOOST_REGEX /**/ | #define HAVE_BOOST_CONTEXT /**/ | #define HAVE_BOOST_COROUTINE /**/ | #define BOOST_COROUTINE_STACK_SIZE 5242880 | #define HAVE_BOOST_GRAPH /**/ | #define HAVE_BOOST_THREAD /**/ | #define HAVE_LIBGMP 1 | #define HAVE_LIBGMP 1 | #define HAVE_CGAL 1 | #define HAVE_CAIROMM 1 | #define PYCAIRO_HEADER | /* end confdefs.h. */ | #include configure:21518: result: no configure:21518: checking for pycairo/py3cairo.h configure:21518: result: no configure:21522: error: pycairo headers not found ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_boost_python=yes ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CAIROMM_CFLAGS_set= ac_cv_env_CAIROMM_CFLAGS_value= ac_cv_env_CAIROMM_LIBS_set= ac_cv_env_CAIROMM_LIBS_value= ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=gcc ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value=' -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include ' ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set=set ac_cv_env_CXXFLAGS_value=' -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 ' ac_cv_env_CXX_set=set ac_cv_env_CXX_value=g++ ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value=' -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt ' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_PKG_CONFIG_LIBDIR_set= ac_cv_env_PKG_CONFIG_LIBDIR_value= ac_cv_env_PKG_CONFIG_PATH_set= ac_cv_env_PKG_CONFIG_PATH_value= ac_cv_env_PKG_CONFIG_set= ac_cv_env_PKG_CONFIG_value= ac_cv_env_PYTHON_VERSION_set= ac_cv_env_PYTHON_VERSION_value= ac_cv_env_PYTHON_set= ac_cv_env_PYTHON_value= ac_cv_env_SPARSEHASH_CFLAGS_set= ac_cv_env_SPARSEHASH_CFLAGS_value= ac_cv_env_SPARSEHASH_LIBS_set= ac_cv_env_SPARSEHASH_LIBS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_header_dlfcn_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_minix_config_h=no ac_cv_header_numpy_arrayobject_h=yes ac_cv_header_pycairo_py3cairo_h=no ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_boost_context_mt___exit=yes ac_cv_lib_boost_coroutine___exit=yes ac_cv_lib_boost_graph___exit=yes ac_cv_lib_boost_iostreams___exit=yes ac_cv_lib_boost_regex___exit=yes ac_cv_lib_boost_thread_mt___exit=yes ac_cv_lib_gmp___gmpz_init=yes ac_cv_objext=o ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_FGREP='/bin/grep -F' ac_cv_path_GREP=/bin/grep ac_cv_path_PYTHON=/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/bin/python ac_cv_path_SED=/bin/sed ac_cv_path_ac_pt_PKG_CONFIG=/bin/pkg-config ac_cv_path_install='/bin/install -c' ac_cv_path_lt_DD=/bin/dd ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_CPP='gcc -E' ac_cv_prog_CXXCPP='g++ -E' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_c99=no ac_cv_prog_cc_g=yes ac_cv_prog_cc_stdc= ac_cv_prog_cxx_g=yes ac_cv_prog_make_make_set=yes ac_cv_safe_to_define___extensions__=yes ac_cv_search_strerror='none required' ac_cv_target=x86_64-pc-linux-gnu am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_pathless_PYTHON=python am_cv_prog_cc_c_o=yes am_cv_prog_tar_pax=gnutar am_cv_python_platform=linux am_cv_python_pyexecdir='${exec_prefix}/lib/python3.7/site-packages' am_cv_python_pythondir='${prefix}/lib/python3.7/site-packages' am_cv_python_version=3.7 ax_cv_boost_context=yes ax_cv_boost_coroutine=yes ax_cv_boost_graph=yes ax_cv_boost_iostreams=yes ax_cv_boost_regex=yes ax_cv_boost_thread=yes ax_cv_cxx_compile_cxx14=yes ax_cv_cxx_openmp=-fopenmp ax_cv_lib_boost_python37___BOOST_PYTHON_MODULE=yes ax_cv_lib_boost_python___BOOST_PYTHON_MODULE=no lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/bin/ld lt_cv_path_LDCXX='/bin/ld -m elf_x86_64' lt_cv_path_NM='/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=no lt_cv_prog_gnu_ld=yes lt_cv_prog_gnu_ldcxx=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=no lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=3458764513820540925 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/bin/dd bs=4096 count=1' pkg_cv_CAIROMM_CFLAGS='-I/usr/include/cairomm-1.0 -I/usr/lib64/cairomm-1.0/include -I/usr/include/cairo -I/usr/include/sigc++-2.0 -I/usr/lib64/sigc++-2.0/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng15 -I/usr/include/uuid -I/usr/include/libdrm ' pkg_cv_CAIROMM_LIBS='-lcairomm-1.0 -lcairo -lsigc-2.0 ' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /uufs/chpc.utah.edu/sys/srcdir/graph-tool/2.27/build-aux/missing aclocal-1.15' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='0' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /uufs/chpc.utah.edu/sys/srcdir/graph-tool/2.27/build-aux/missing autoconf' AUTOHEADER='${SHELL} /uufs/chpc.utah.edu/sys/srcdir/graph-tool/2.27/build-aux/missing autoheader' AUTOMAKE='${SHELL} /uufs/chpc.utah.edu/sys/srcdir/graph-tool/2.27/build-aux/missing automake-1.15' AWK='gawk' BOOST_CONTEXT_LIB='-lboost_context-mt' BOOST_COROUTINE_LIB='-lboost_coroutine' BOOST_CPPFLAGS='-pthread -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include' BOOST_GRAPH_LIB='-lboost_graph' BOOST_IOSTREAMS_LIB='-lboost_iostreams' BOOST_LDFLAGS='-L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib' BOOST_PYTHON_LIB='boost_python37' BOOST_REGEX_LIB='-lboost_regex' BOOST_THREAD_LIB='-lboost_thread-mt -lpthread' CAIROMM_CFLAGS='-I/usr/include/cairomm-1.0 -I/usr/lib64/cairomm-1.0/include -I/usr/include/cairo -I/usr/include/sigc++-2.0 -I/usr/lib64/sigc++-2.0/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng15 -I/usr/include/uuid -I/usr/include/libdrm' CAIROMM_LIBS='-lcairomm-1.0 -lcairo -lsigc-2.0 ' CC='gcc' CCDEPMODE='depmode=gcc3' CFLAGS=' -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include ' CGAL_CPPFLAGS='-I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include' CGAL_FLAGS='-frounding-math' CGAL_LDFLAGS='-L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib -lCGAL -lCGAL_Core -lgmp -lboost_thread-mt -lpthread' CPP='gcc -E' CPPFLAGS=' -I/usr/include/cairomm-1.0 -I/usr/lib64/cairomm-1.0/include -I/usr/include/cairo -I/usr/include/sigc++-2.0 -I/usr/lib64/sigc++-2.0/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng15 -I/usr/include/uuid -I/usr/include/libdrm -I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m -DNDEBUG ' CXX='g++' CXXCPP='g++ -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS='-fopenmp -O3 -fvisibility=default -fvisibility-inlines-hidden -Wno-deprecated -Wall -Wextra -ftemplate-backtrace-limit=0 -m64 -O2 -fPIC -I/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/include -I/uufs/chpc.utah.edu/sys/installdir/sparsehash/2.0.2/include -I/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/include -std=c++14 ' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' DLLTOOL='false' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' EXPAT_CFLAGS='-I/usr/include' EXPAT_LDFLAGS='-L/usr/lib' EXPAT_LIBS='-lexpat' EXPAT_VERSION='' FGREP='/bin/grep -F' GRAPH_TOOL_VERSION_MAJOR='2' GRAPH_TOOL_VERSION_MINOR='27' GREP='/bin/grep' HAVE_CXX14='1' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='/bin/ld -m elf_x86_64' LDFLAGS=' -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -L/uufs/chpc.utah.edu/sys/installdir/cgal/4.13.1/lib64 -lCGAL -Wl,-rpath=/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -L/uufs/chpc.utah.edu/sys/installdir/boost/1.68.0-5.4.0g-3.7.3py/lib -lboost_iostreams -lboost_context-mt -lboost_regex -lboost_graph -lboost_coroutine -lboost_thread-mt ' LIBOBJS='' LIBS='-lgmp -lgmp ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAKEINFO='${SHELL} /uufs/chpc.utah.edu/sys/srcdir/graph-tool/2.27/build-aux/missing makeinfo' MANIFEST_TOOL=':' MKDIR_P='/bin/mkdir -p' MOD_CPPFLAGS='' MOD_DIR='/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib/python3.7/site-packages/graph_tool' MOD_LDFLAGS='' MOD_LIBADD='' NM='/bin/nm -B' NMEDIT='' NO_PREFIX_PACKAGE_DATA_DIR='' NO_PREFIX_PACKAGE_DOC_DIR='' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='graph-tool' PACKAGE_BUGREPORT='http://graph-tool.skewed.de/issues' PACKAGE_DATA_DIR='' PACKAGE_DOC_DIR='' PACKAGE_NAME='graph-tool' PACKAGE_STRING='graph-tool 2.27' PACKAGE_TARNAME='graph-tool' PACKAGE_URL='http://graph-tool.skewed.de' PACKAGE_VERSION='2.27' PATH_SEPARATOR=':' PKG_CONFIG='/bin/pkg-config' PKG_CONFIG_LIBDIR='' PKG_CONFIG_PATH='' PYTHON='/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/bin/python' PYTHON_CPPFLAGS='-I/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/include/python3.7m' PYTHON_EXEC_PREFIX='${exec_prefix}' PYTHON_EXTRA_LDFLAGS='-Xlinker -export-dynamic' PYTHON_EXTRA_LIBS='-lcrypt -lpthread -ldl -lutil -lm' PYTHON_FULL_VERSION='3.7.3' PYTHON_LIBS='-L/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib -lpython3.7m' PYTHON_PLATFORM='linux' PYTHON_PREFIX='${prefix}' PYTHON_SITE_PKG='/uufs/chpc.utah.edu/sys/installdir/python/3.7.3/lib/python3.7/site-packages' PYTHON_VERSION='3.7' RANLIB='ranlib' SED='/bin/sed' SET_MAKE='' SHELL='/bin/sh' SPARSEHASH_CFLAGS='' SPARSEHASH_LIBS='' STRIP='strip' VERSION='2.27' ac_ct_AR='ar' ac_ct_CC='gcc' ac_ct_CXX='' ac_ct_DUMPBIN='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='tar --format=posix -chf - "$$tardir"' am__untar='tar -xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /uufs/chpc.utah.edu/sys/srcdir/graph-tool/2.27/build-aux/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' pkgconfig_libdir='' pkgconfig_libfile='' pkgconfigdir='${libdir}/pkgconfig' pkgpyexecdir='${pyexecdir}/graph-tool' pkgpythondir='${pythondir}/graph-tool' prefix='/uufs/chpc.utah.edu/sys/installdir/graph-tool/2.27' program_transform_name='s,x,x,' psdir='${docdir}' pyexecdir='${exec_prefix}/lib/python3.7/site-packages' pythondir='${prefix}/lib/python3.7/site-packages' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target='x86_64-pc-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='pc' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "graph-tool" #define PACKAGE_TARNAME "graph-tool" #define PACKAGE_VERSION "2.27" #define PACKAGE_STRING "graph-tool 2.27" #define PACKAGE_BUGREPORT "http://graph-tool.skewed.de/issues" #define PACKAGE_URL "http://graph-tool.skewed.de" #define PACKAGE "graph-tool" #define VERSION "2.27" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define __EXTENSIONS__ 1 #define _ALL_SOURCE 1 #define _GNU_SOURCE 1 #define _POSIX_PTHREAD_SEMANTICS 1 #define _TANDEM_SOURCE 1 #define STDC_HEADERS 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_CXX14 1 #define OPENMP_MIN_THRESH 300 #define HAVE_OPENMP 1 #define HAVE_PYTHON "3.7" #define HAVE_BOOST /**/ #define HAVE_BOOST_PYTHON /**/ #define HAVE_BOOST_IOSTREAMS /**/ #define HAVE_BOOST_REGEX /**/ #define HAVE_BOOST_CONTEXT /**/ #define HAVE_BOOST_COROUTINE /**/ #define BOOST_COROUTINE_STACK_SIZE 5242880 #define HAVE_BOOST_GRAPH /**/ #define HAVE_BOOST_THREAD /**/ #define HAVE_LIBGMP 1 #define HAVE_LIBGMP 1 #define HAVE_CGAL 1 #define HAVE_CAIROMM 1 #define PYCAIRO_HEADER configure: exit 1